PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1HEZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	90.9	L1	11	L1-11-1	12	RTSQSISSYLN	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	12	YAASSLQS	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L3	9	L3-9-cis7-1	5	QQSYSTPRT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	92.3	H1	13	H1-13-1	15	AASGFTFSGYGMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	80.0	H2	10	H2-10-2	15	LISYDESNKY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H3	14	H3-14-*	-1	AKVKFYDPTAPNDY	BBBABBBAABBBAB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	12	RDNSKNTL	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	90.9	L1	11	L1-11-1	13	RTSQSISSYLN	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	8	YAASSLQS	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L3	9	L3-9-cis7-1	13	QQSYSTPRT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	92.3	H1	13	H1-13-1	11	AASGFTFSGYGMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	80.0	H2	10	H2-10-2	6	LISYDESNKY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H3	14	H3-14-*	-1	AKVKFYDPTAPNDY	BBBABABAABBBAB
D	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	10	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022