PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1H8O

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1S70*01	96.7	Mo_IGHV1S70*01	100.0	H1	13	H1-13-1	8	KASGYTFTSYWIN	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1S70*01	96.7	Mo_IGHV1S70*01	80.0	H2	10	H2-10-1	13	NIYPSDSYTN	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1S70*01	96.7	Mo_IGHV1S70*01	0.0	H3	5	H3-5-*	-1	ARWGY	BBBLB
A	heavy	Mus.musculus	Mo_IGHV1S70*01	96.7	Mo_IGHV1S70*01	100.0	H4	8	H4-8-1	11	VDKSSSTA	BBAAALBB
A	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	100.0	L1	11	L1-11-1	10	KASQDVGTAVA	BBABBAEABBB
A	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	100.0	L2	8	L2-8-1	8	YWASTRHT	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	100.0	L3	9	L3-9-cis7-1	8	QQYSSYPLT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1S70*01	96.7	Mo_IGHV1S70*01	100.0	H1	13	H1-13-1	11	KASGYTFTSYWIN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1S70*01	96.7	Mo_IGHV1S70*01	80.0	H2	10	H2-10-1	13	NIYPSDSYTN	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1S70*01	96.7	Mo_IGHV1S70*01	0.0	H3	5	H3-5-*	-1	ARWGY	BBBLB
B	heavy	Mus.musculus	Mo_IGHV1S70*01	96.7	Mo_IGHV1S70*01	100.0	H4	8	H4-8-1	11	VDKSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	100.0	L1	11	L1-11-1	12	KASQDVGTAVA	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	100.0	L2	8	L2-8-1	16	YWASTRHT	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	100.0	L3	9	L3-9-cis7-1	11	QQYSSYPLT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	100.0	L4	6	L4-6-1	17	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022