PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1GHF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV9-3*02	90.3	CDRLenMismatch	-1.0	H1	12	H1-12-*	-1	KLWYTFTDYGMN
H	heavy	Mus.musculus	Mo_IGHV9-3*02	90.3	Mo_IGHV9-3*02	80.0	H2	10	H2-10-1	16	WIQTNTEEPT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-3*02	90.3	Mo_IGHV9-3*02	100.0	H3	9	H3-9-*	-1	ARVEAGFDY	BBBBBEBAB
H	heavy	Mus.musculus	Mo_IGHV9-3*02	90.3	Mo_IGHV9-3*02	87.5	H4	8	H4-8-1	20	LETSAFTA	EBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	81.8	L1	11	L1-11-1	11	RESQDISNSLN	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L2	8	L2-8-1	7	YYTSRLHS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L3	9	L3-9-cis7-1	10	QQGNTLPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	83.3	L4	6	L4-6-1	10	GTGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022