PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1GAF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Mo_IGHV14-3*02	93.2	Mo_IGHV14-3*02	100.0	H1	13	H1-13-*	-1	TASGFNIKDTYMH	BBBLBBAAAABBB
H	heavy	Homo.sapiens	Mo_IGHV14-3*02	93.2	Mo_IGHV14-3*02	80.0	H2	10	H2-10-1	21	RIDPANVDTK	BBBAAALBBB
H	heavy	Homo.sapiens	Mo_IGHV14-3*02	93.2	Mo_IGHV14-3*02	50.0	H3	7	H3-7-*	-1	ASYYGIY	BBBLLAB
H	heavy	Homo.sapiens	Mo_IGHV14-3*02	93.2	Mo_IGHV14-3*02	75.0	H4	8	H4-8-1	4	ADTSSKTT	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV9-124*01	100.0	Mo_IGKV9-124*01	81.8	L1	11	L1-11-2	12	RASQEINGYLG	BBABBALLBBB
L	kappa	Homo.sapiens	Mo_IGKV9-124*01	100.0	Mo_IGKV9-124*01	87.5	L2	8	L2-8-1	6	YAASTLHS	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV9-124*01	100.0	Mo_IGKV9-124*01	100.0	L3	9	L3-9-cis7-1	10	LQYASYPRT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV9-124*01	100.0	Mo_IGKV9-124*01	100.0	L4	6	L4-6-2	12	RSGSDY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022