PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1FPT

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-54*03	93.2	Mo_IGHV1-54*03	92.3	H1	13	H1-13-1	15	KASGYAFTNYLIQ	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-54*03	93.2	Mo_IGHV1-54*03	90.0	H2	10	H2-10-1	12	VINPGSGGTD	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-54*03	93.2	Mo_IGHV1-54*03	100.0	H3	13	H3-13-*	-1	ARDFYDYDVGFDY	BBBBAABBAEBAB
H	heavy	Mus.musculus	Mo_IGHV1-54*03	93.2	Mo_IGHV1-54*03	75.0	H4	8	H4-8-1	21	ADKSSSIV	BBAABLBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	87.5	L1	16	L1-16-1	16	SSSQSLvhsngKTYLH	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L2	8	L2-8-*	-1	YKVSNRFS	AAAABBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	100.0	L3	9	L3-9-cis7-1	10	SQSTHVPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	98.6	Mo_IGKV1-110*01	83.3	L4	6	L4-6-1	20	GSGTYF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022