PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1FL6

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	100.0	L1	16	L1-16-*	-1	RSSQSIvhsngNTYLE	BBABBABBABEBBBBB
A	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	87.5	L2	8	L2-8-*	-1	YKVSNRFS	AAAABBBB
A	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	100.0	L3	9	L3-9-cis7-1	16	FQGSHVPRT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H1	13	H1-13-1	11	ATSGFTFTDYYMS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H2	12	H2-12-1	11	FIRNKanGYTTE	BBBBAAALLBBB
B	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H3	10	H3-10-*	-1	ARDGSYAMDY	BBBBAAEBAB
B	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H4	8	H4-8-1	14	RDNSQSIL	BBAAALBB
H	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H1	13	H1-13-1	11	ATSGFTFTDYYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H2	12	H2-12-1	11	FIRNKanGYTTE	BBBBAAALLBBB
H	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H3	10	H3-10-*	-1	ARDGSYAMDY	BBBBAAEBAB
H	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H4	8	H4-8-1	14	RDNSQSIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	100.0	L1	16	L1-16-*	-1	RSSQSIvhsngNTYLE	BBABBABBEBEBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	87.5	L2	8	L2-8-*	-1	YKVSNRFS	AAAABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	100.0	L3	9	L3-9-cis7-1	15	FQGSHVPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022