PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1FL5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	100.0	L1	16	L1-16-1	12	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	87.5	L2	8	L2-8-*	-1	YKVSNRFS	BLLABBBA
A	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	100.0	L3	9	L3-9-cis7-1	20	FQGSHVPRT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H1	13	H1-13-1	10	ATSGFTFTDYYMS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H2	12	H2-12-1	9	FIRNKanGYTTE	BBBBAAALLBBB
B	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H3	10	H3-10-*	-1	ARDGSYAMDY	BBBBLLBBAB
B	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H4	8	H4-8-1	7	RDNSQSIL	BBAAALBB
H	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H1	13	H1-13-1	9	ATSGFTFTDYYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H2	12	H2-12-1	8	FIRNKanGYTTE	BBBBAAALLBBB
H	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H3	10	H3-10-*	-1	ARDGSYAMDY	BBBBLLBBAB
H	heavy	Homo.sapiens	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	100.0	H4	8	H4-8-1	7	RDNSQSIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	100.0	L1	16	L1-16-1	13	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	87.5	L2	8	L2-8-*	-1	YKVSNRFS	BLLABBBA
L	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	100.0	L3	9	L3-9-cis7-1	18	FQGSHVPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	98.5	Mo_IGKV1-117*02	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022