PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1FBI

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-69*02	97.3	Mo_IGHV1-69*02	100.0	H1	13	H1-13-1	12	KASGYTFTSYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-69*02	97.3	Mo_IGHV1-69*02	90.0	H2	10	H2-10-1	24	EIDPSDSYPN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-69*02	97.3	Mo_IGHV1-69*02	50.0	H3	15	H3-15-*	-1	ASLYYYGTsYGVLDY
H	heavy	Mus.musculus	Mo_IGHV1-69*02	97.3	Mo_IGHV1-69*02	100.0	H4	8	H4-8-1	13	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	97.1	Mo_IGKV10-96*02	100.0	L1	11	L1-11-2	12	RASQDISNYLN	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	97.1	Mo_IGKV10-96*02	100.0	L2	8	L2-8-1	7	YYTSRLHS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	97.1	Mo_IGKV10-96*02	85.7	L3	9	L3-9-cis7-1	18	QQGYTLPYT	BBAAEBbBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	97.1	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	25	GSGTDY	EEEABB
P	kappa	Mus.musculus	Mo_IGKV10-96*02	97.1	Mo_IGKV10-96*02	100.0	L1	11	L1-11-2	15	RASQDISNYLN	BBABBALLBBB
P	kappa	Mus.musculus	Mo_IGKV10-96*02	97.1	Mo_IGKV10-96*02	100.0	L2	8	L2-8-1	23	YYTSRLHS	BLLBBBBB
P	kappa	Mus.musculus	Mo_IGKV10-96*02	97.1	Mo_IGKV10-96*02	85.7	L3	9	L3-9-cis7-1	10	QQGYTLPYT	BBAABBbBB
P	kappa	Mus.musculus	Mo_IGKV10-96*02	97.1	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	13	GSGTDY	EBEABB
Q	heavy	Mus.musculus	Mo_IGHV1-69*02	97.3	Mo_IGHV1-69*02	100.0	H1	13	H1-13-*	-1	KASGYTFTSYWMH	BBBLEBBAABBBB
Q	heavy	Mus.musculus	Mo_IGHV1-69*02	97.3	Mo_IGHV1-69*02	90.0	H2	10	H2-10-1	27	EIDPSDSYPN	BBBAAALBBB
Q	heavy	Mus.musculus	Mo_IGHV1-69*02	97.3	Mo_IGHV1-69*02	50.0	H3	15	H3-15-*	-1	ASLYYYGTsYGVLDY
Q	heavy	Mus.musculus	Mo_IGHV1-69*02	97.3	Mo_IGHV1-69*02	100.0	H4	8	H4-8-1	9	VDKSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022