PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1EJO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-9-1*01	94.4	Mo_IGHV5-9-1*01	92.3	H1	13	H1-13-1	15	AASGFTFSSYTMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-9-1*01	94.4	Mo_IGHV5-9-1*01	90.0	H2	10	H2-10-2	8	TISSGGAYTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-9-1*01	94.4	Mo_IGHV5-9-1*01	50.0	H3	13	H3-13-*	-1	VRRAFDSDVGFAS	BBABAABBAEBAB
H	heavy	Mus.musculus	Mo_IGHV5-9-1*01	94.4	Mo_IGHV5-9-1*01	62.5	H4	8	H4-8-1	8	DDNAESTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	100.0	Mo_IGKV3-5*01	100.0	L1	15	L1-15-1	7	RASESVDSYgnsfMH	BBABBABBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	100.0	Mo_IGKV3-5*01	100.0	L2	8	L2-8-1	9	YRASNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	100.0	Mo_IGKV3-5*01	100.0	L3	9	L3-9-cis7-1	4	QQSNEDPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	100.0	Mo_IGKV3-5*01	100.0	L4	6	L4-6-1	10	GSRTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022