PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1EGJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S107*01	93.4	Mo_IGHV1S107*01	84.6	H1	13	H1-13-1	11	KASGYTFTDYYMK	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S107*01	93.4	Mo_IGHV1S107*01	80.0	H2	10	H2-10-1	14	DINPSNGGTL	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S107*01	93.4	Mo_IGHV1S107*01	0.0	H3	12	H3-12-*	-1	SRGDGIHGGFAY	BBBALAALBBAB
H	heavy	Mus.musculus	Mo_IGHV1S107*01	93.4	Mo_IGHV1S107*01	100.0	H4	8	H4-8-1	13	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	80.0	L1	15	L1-15-1	14	RANESVYSYgdsfMH	BBABBABELLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	87.5	L2	8	L2-8-1	11	YLASNLAS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L3	9	L3-9-cis7-1	13	QQNNEDPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L4	6	L4-6-3	15	GSRTDF	EAAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022