PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1E4W

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S81*01	96.7	Mo_IGHV1S81*01	84.6	H1	13	H1-13-1	17	KASGFTFTNYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S81*01	96.7	Mo_IGHV1S81*01	90.0	H2	10	H2-10-1	8	EILPSNGRTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S81*01	96.7	Mo_IGHV1S81*01	0.0	H3	7	H3-7-*	-1	ARSPSDY	BBBbLBB
H	heavy	Mus.musculus	Mo_IGHV1S81*01	96.7	Mo_IGHV1S81*01	87.5	H4	8	H4-8-1	6	VDKSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	94.2	Mo_IGKV10-96*02	90.9	L1	11	L1-11-2	8	RASQDISHYLN	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	94.2	Mo_IGKV10-96*02	87.5	L2	8	L2-8-1	8	YYTSTLHS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	94.2	Mo_IGKV10-96*02	71.4	L3	9	L3-9-cis7-1	8	QQGGALPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	94.2	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	6	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022