PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1DZB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H1	13	H1-13-1	15	TASGFNIKDTYMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H2	10	H2-10-1	7	RIDPANGNTK	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H3	9	H3-9-*	-1	ARWDWYFDV	BBBBBLABB
A	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	6	ADTSSNTA	BBAAALBB
A	kappa	Mus.musculus	Mo_IGKV14-126*01	91.3	Mo_IGKV14-126*01	81.8	L1	11	L1-11-*	-1	KASQDINSYLR	BBALAEBLBBB
A	kappa	Mus.musculus	Mo_IGKV14-126*01	91.3	Mo_IGKV14-126*01	100.0	L2	8	L2-8-1	7	YYATSLAD	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV14-126*01	91.3	Mo_IGKV14-126*01	100.0	L3	9	L3-9-cis7-1	12	LQHGESPYT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV14-126*01	91.3	Mo_IGKV14-126*01	100.0	L4	6	L4-6-1	9	GSGQDY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H1	13	H1-13-1	16	TASGFNIKDTYMH	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H2	10	H2-10-1	7	RIDPANGNTK	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H3	9	H3-9-*	-1	ARWDWYFDV	BBBBBLABB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	97.3	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	12	ADTSSNTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV14-126*01	91.3	Mo_IGKV14-126*01	81.8	L1	11	L1-11-*	-1	KASQDINSYLR	BBBLAEBLBBB
B	kappa	Mus.musculus	Mo_IGKV14-126*01	91.3	Mo_IGKV14-126*01	100.0	L2	8	L2-8-1	7	YYATSLAD	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV14-126*01	91.3	Mo_IGKV14-126*01	100.0	L3	9	L3-9-cis7-1	16	LQHGESPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV14-126*01	91.3	Mo_IGKV14-126*01	100.0	L4	6	L4-6-1	13	GSGQDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022