PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1DSF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-4*02	94.4	Mo_IGHV5-4*02	84.6	H1	13	H1-13-*	-1	AASGFIFSDNYMY	BBBLBAEAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-4*02	94.4	Mo_IGHV5-4*02	70.0	H2	10	H2-10-4	10	TISDGGTYID	BBBBLLABBB
H	heavy	Mus.musculus	Mo_IGHV5-4*02	94.4	Mo_IGHV5-4*02	50.0	H3	14	H3-14-*	-1	GRSPIYYDYAPFTY	BBBBAAALABBLAB
H	heavy	Mus.musculus	Mo_IGHV5-4*02	94.4	Mo_IGHV5-4*02	100.0	H4	8	H4-8-*	-1	RDNAKNNL	BBBALLBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	81.2	L1	16	L1-16-1	6	RSSQNLvhsdgKTYLH	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L2	8	L2-8-1	6	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L3	9	L3-9-cis7-1	11	SQSTHVPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022