PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1DQL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.8	Hu_IGHV3-30*10	100.0	H1	13	H1-13-1	12	AASGFTFSSYAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.8	Hu_IGHV3-30*10	80.0	H2	10	H2-10-2	8	VISSDGGNKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.8	Hu_IGHV3-30*10	100.0	H3	16	H3-16-*	-1	ARGNPPYSsgWGGGDY
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.8	Hu_IGHV3-30*10	75.0	H4	8	H4-8-1	15	RNDSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	98.5	Hu_IGKV1-6*01	90.9	L1	11	L1-11-1	9	RASQDIRNDLG	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	98.5	Hu_IGKV1-6*01	100.0	L2	8	L2-8-1	12	YAASSLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	98.5	Hu_IGKV1-6*01	28.6	L3	8	L3-8-3	13	LQQNSNWT	BBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	98.5	Hu_IGKV1-6*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022