PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1DQD

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3-8*02	94.5	Mo_IGHV3-8*02	100.0	H1	13	H1-13-*	-1	SVTGDSITSGYWN	BBBLBBAABEBBB
H	heavy	Mus.musculus	Mo_IGHV3-8*02	94.5	Mo_IGHV3-8*02	100.0	H2	9	H2-9-1	8	YISYSGSTY	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-8*02	94.5	Mo_IGHV3-8*02	50.0	H3	16	H3-16-*	-1	ASPPGYygSGPYAMDY
H	heavy	Mus.musculus	Mo_IGHV3-8*02	94.5	Mo_IGHV3-8*02	87.5	H4	8	H4-8-1	28	RDTSRNQY	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-57*01	95.7	Mo_IGKV4-57*01	100.0	L1	10	L1-10-1	8	SASSSVSYMH	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-57*01	95.7	Mo_IGKV4-57*01	87.5	L2	8	L2-8-1	12	YTTSNLAS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV4-57*01	95.7	Mo_IGKV4-57*01	87.5	L3	9	L3-9-cis7-1	9	QQRSTYPPT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-57*01	95.7	Mo_IGKV4-57*01	100.0	L4	6	L4-6-1	13	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022