PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1DFB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-9*03	100.0	Hu_IGHV3-9*03	92.3	H1	13	H1-13-1	16	AASGFTFNDYAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*03	100.0	Hu_IGHV3-9*03	80.0	H2	10	H2-10-2	14	GISWDSSSIG	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*03	100.0	Hu_IGHV3-9*03	33.3	H3	19	H3-19-*	-1	VKGRDYYDsggyfTVAFDI
H	heavy	Homo.sapiens	Hu_IGHV3-9*03	100.0	Hu_IGHV3-9*03	100.0	H4	8	H4-8-1	13	RDNAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	90.9	L1	11	L1-11-1	16	RASQSISRWLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	20	YKASSLES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L3	7	L3-7-*	-1	QQYNSYS
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	29	GSGTEF	EBLABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022