PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1D5B

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Mo_IGKV14-111*01	100.0	Mo_IGKV14-111*01	90.9	L1	11	L1-11-*	-1	KASQDINSYLN	BBAEBALLBBB
A	kappa	Homo.sapiens	Mo_IGKV14-111*01	100.0	Mo_IGKV14-111*01	87.5	L2	8	L2-8-1	10	YRTNRLVD	BLLABBBB
A	kappa	Homo.sapiens	Mo_IGKV14-111*01	100.0	Mo_IGKV14-111*01	100.0	L3	9	L3-9-cis7-1	10	LQYDEFPYT	BBAABBbBB
A	kappa	Homo.sapiens	Mo_IGKV14-111*01	100.0	Mo_IGKV14-111*01	100.0	L4	6	L4-6-1	11	GSGQDY	EEEABB
B	heavy	Homo.sapiens	Mo_IGHV1-9*01	94.5	Mo_IGHV1-9*01	76.9	H1	13	H1-13-1	12	KATGYTFSSFWIE	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Mo_IGHV1-9*01	94.5	Mo_IGHV1-9*01	80.0	H2	10	H2-10-1	13	EILPGSGGTH	BBBAAALBBB
B	heavy	Homo.sapiens	Mo_IGHV1-9*01	94.5	Mo_IGHV1-9*01	100.0	H3	13	H3-13-*	-1	ARGHSYYFYDGDY	BBBBBAABBAEBB
B	heavy	Homo.sapiens	Mo_IGHV1-9*01	94.5	Mo_IGHV1-9*01	87.5	H4	8	H4-8-1	11	ADKSSNTA	BBAAALBB
H	heavy	Homo.sapiens	Mo_IGHV1-9*01	94.5	Mo_IGHV1-9*01	76.9	H1	13	H1-13-1	12	KATGYTFSSFWIE	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV1-9*01	94.5	Mo_IGHV1-9*01	80.0	H2	10	H2-10-1	13	EILPGSGGTH	BBBAAALBBB
H	heavy	Homo.sapiens	Mo_IGHV1-9*01	94.5	Mo_IGHV1-9*01	100.0	H3	13	H3-13-*	-1	ARGHSYYFYDGDY	BBBBBAABBAEBB
H	heavy	Homo.sapiens	Mo_IGHV1-9*01	94.5	Mo_IGHV1-9*01	87.5	H4	8	H4-8-1	11	ADKSSNTA	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV14-111*01	100.0	Mo_IGKV14-111*01	90.9	L1	11	L1-11-*	-1	KASQDINSYLN	BBAEBALLBBB
L	kappa	Homo.sapiens	Mo_IGKV14-111*01	100.0	Mo_IGKV14-111*01	87.5	L2	8	L2-8-1	11	YRTNRLVD	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV14-111*01	100.0	Mo_IGKV14-111*01	100.0	L3	9	L3-9-cis7-1	9	LQYDEFPYT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV14-111*01	100.0	Mo_IGKV14-111*01	100.0	L4	6	L4-6-1	11	GSGQDY	EEEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022