PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1CZ8

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Hu_IGHV3-66*01	86.3	Mo_IGHV9-1*02	76.9	H1	13	H1-13-1	10	AASGYDFTHYGMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Hu_IGHV3-66*01	86.3	Mo_IGHV9-1*02	100.0	H2	10	H2-10-1	16	WINTYTGEPT	BBBAAALBBB
H	heavy	Mus.musculus	Hu_IGHV3-66*01	86.3	Hu_IGHV3-66*01	50.0	H3	16	H3-16-*	-1	AKYPYYygTSHWYFDV
H	heavy	Mus.musculus	Hu_IGHV3-66*01	86.3	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	9	LDTSKSTA	BBAAALBB
L	kappa	Mus.musculus	Hu_IGKV1D-13*01	98.5	Mo_IGKV10-94*01	90.9	L1	11	L1-11-1	9	SASQDISNYLN	BBABBAEABBB
L	kappa	Mus.musculus	Hu_IGKV1D-13*01	98.5	Mo_IGKV10-94*01	87.5	L2	8	L2-8-1	6	YFTSSLHS	BLLABBBB
L	kappa	Mus.musculus	Hu_IGKV1D-13*01	98.5	Hu_IGKV1D-13*01	42.9	L3	9	L3-9-cis7-1	9	QQYSTVPWT	BBAABBbBB
L	kappa	Mus.musculus	Hu_IGKV1D-13*01	98.5	Hu_IGKV1D-13*01	100.0	L4	6	L4-6-1	9	GSGTDF	EEEABB
X	kappa	Mus.musculus	Hu_IGKV1D-13*01	98.5	Mo_IGKV10-94*01	90.9	L1	11	L1-11-1	9	SASQDISNYLN	BBABBAEABBB
X	kappa	Mus.musculus	Hu_IGKV1D-13*01	98.5	Mo_IGKV10-94*01	87.5	L2	8	L2-8-1	5	YFTSSLHS	BLLABBBB
X	kappa	Mus.musculus	Hu_IGKV1D-13*01	98.5	Hu_IGKV1D-13*01	42.9	L3	9	L3-9-cis7-1	10	QQYSTVPWT	BBAABBbBB
X	kappa	Mus.musculus	Hu_IGKV1D-13*01	98.5	Hu_IGKV1D-13*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
Y	heavy	Mus.musculus	Hu_IGHV3-66*01	86.3	Mo_IGHV9-1*02	76.9	H1	13	H1-13-1	10	AASGYDFTHYGMN	BBBLBBAAABBBB
Y	heavy	Mus.musculus	Hu_IGHV3-66*01	86.3	Mo_IGHV9-1*02	100.0	H2	10	H2-10-1	13	WINTYTGEPT	BBBAAALBBB
Y	heavy	Mus.musculus	Hu_IGHV3-66*01	86.3	Hu_IGHV3-66*01	50.0	H3	16	H3-16-*	-1	AKYPYYygTSHWYFDV
Y	heavy	Mus.musculus	Hu_IGHV3-66*01	86.3	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	9	LDTSKSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022