PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1CU4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV14-4*02	95.8	Mo_IGHV14-4*02	84.6	H1	13	H1-13-*	-1	TASGFNIKDYYIQ	BBAABBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV14-4*02	95.8	Mo_IGHV14-4*02	80.0	H2	10	H2-10-1	19	WIDPENGNSE	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV14-4*02	95.8	Mo_IGHV14-4*02	100.0	H3	7	H3-7-*	-1	NADLHDY	BBAAALB
H	heavy	Mus.musculus	Mo_IGHV14-4*02	95.8	Mo_IGHV14-4*02	87.5	H4	8	H4-8-1	9	ADTLSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	93.8	L1	16	L1-16-1	8	KSSQSLldsdgKTYLI	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	75.0	L2	8	L2-8-1	10	FLVSKRDS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	12	WQGTHFPHT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022