PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1CF8

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3-2*02	100.0	Mo_IGHV3-2*02	92.9	H1	14	H1-14-1	11	TVTGYSITSgYAWN	BBBLBBAAABEBBB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	100.0	Mo_IGHV3-2*02	66.7	H2	9	H2-9-1	12	YIRYSGDTR	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	100.0	Mo_IGHV3-2*02	50.0	H3	9	H3-9-*	-1	AIGYGNSDY	BBEBEABBB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	100.0	Mo_IGHV3-2*02	100.0	H4	8	H4-8-1	15	RDTSKNQF	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-79*01	94.2	Mo_IGKV4-79*01	83.3	L1	12	L1-12-1	14	SASSSVSsNYVY	BBABBBBAAABB
L	kappa	Mus.musculus	Mo_IGKV4-79*01	94.2	Mo_IGKV4-79*01	100.0	L2	8	L2-8-1	6	YSTSNLAS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV4-79*01	94.2	Mo_IGKV4-79*01	62.5	L3	9	L3-9-cis7-1	17	LQWSSFPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-79*01	94.2	Mo_IGKV4-79*01	100.0	L4	6	L4-6-1	15	GSGTSY	EEEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022