PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1CE1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-59*04	89.0	Ra_IGHV7-7*01	84.6	H1	13	H1-13-1	10	TVSGFTFTDFYMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*04	89.0	Ra_IGHV7-7*01	83.3	H2	12	H2-12-1	8	FIRDKakGYTTE	BBBBAAALLBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*04	89.0	Hu_IGHV4-59*04	100.0	H3	12	H3-12-*	-1	AREGHTAAPFDY	BBAEAABBbLAB
H	heavy	Homo.sapiens	Hu_IGHV4-59*04	89.0	Hu_IGHV4-59*04	100.0	H4	8	H4-8-1	9	VDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Ra_IGKV22S1*01	90.9	L1	11	L1-11-1	7	KASQNIDKYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Ra_IGKV22S1*01	100.0	L2	8	L2-8-1	9	YNTNNLQT	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	14.3	L3	8	L3-8-*	-1	QHISRPRT
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022