PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1C5B

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-53*01	91.8	Mo_IGHV1-53*01	84.6	H1	13	H1-13-1	8	RASGYSFTSYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-53*01	91.8	Mo_IGHV1-53*01	70.0	H2	10	H2-10-1	9	LIDPSNGRTN	BBBAAALBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-53*01	91.8	Mo_IGHV1-53*01	50.0	H3	5	H3-5-*	-1	VRIAY	BBBLB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-53*01	91.8	Mo_IGHV1-53*01	87.5	H4	8	H4-8-1	7	VDTSSSTA	BBAAALBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV9-124*01	95.7	Mo_IGKV9-124*01	90.9	L1	11	L1-11-2	7	RTSQEISGYLS	BBABBALLBBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV9-124*01	95.7	Mo_IGKV9-124*01	62.5	L2	8	L2-8-*	-1	YDATKLDS	BLLABBBA
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV9-124*01	95.7	Mo_IGKV9-124*01	85.7	L3	9	L3-9-cis7-1	11	LQYASFPRT	BBAABBbBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV9-124*01	95.7	Mo_IGKV9-124*01	100.0	L4	6	L4-6-2	12	RSGSDY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022