PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1C1E

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV9-1*02	93.2	Mo_IGHV9-1*02	92.3	H1	13	H1-13-1	12	KASGYMFTNYGMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	93.2	Mo_IGHV9-1*02	80.0	H2	10	H2-10-1	24	WINPYTGEST	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	93.2	Mo_IGHV9-1*02	100.0	H3	12	H3-12-1	18	ARGTTIVRAMDY	BBBBAAALBBAB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	93.2	Mo_IGHV9-1*02	87.5	H4	8	H4-8-1	13	LETSATTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	94.1	Mo_IGKV1-110*01	100.0	L1	16	L1-16-1	8	RSSQSLvhsngNTYLH	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	94.1	Mo_IGKV1-110*01	100.0	L2	8	L2-8-1	7	YKVSNRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	94.1	Mo_IGKV1-110*01	57.1	L3	9	L3-9-*	-1	FQSTHFFPT	BBAABBLBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	94.1	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022