PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1BRE

#CDRs = 4; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-2	14	QASQDISDYLI	BBABBALLBBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	19	YDASTLET	BLEABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	85.7	L3	9	L3-9-cis7-1	14	QQYDDlPYT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	66.7	L4	6	L4-6-1	17	GSGTEY	EBEABB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	19	QASQDISDYLI	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	23	YDASTLET	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	85.7	L3	9	L3-9-cis7-1	19	QQYDDlPYT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	66.7	L4	6	L4-6-1	12	GSGTEY	EBEABB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	17	QASQDISDYLI	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	13	YDASTLET	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	85.7	L3	9	L3-9-cis7-1	23	QQYDDlPYT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	66.7	L4	6	L4-6-1	22	GSGTEY	EEEABB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-*	-1	QASQDISDYLI	BBABBBBLBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	24	YDASTLET	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	85.7	L3	9	L3-9-cis7-1	16	QQYDDlPYT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	66.7	L4	6	L4-6-*	-1	GSGTEY	EBLABB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	18	QASQDISDYLI	BBABBAEABBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	18	YDASTLET	BLEABBBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	85.7	L3	9	L3-9-cis7-1	15	QQYDDlPYT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	66.7	L4	6	L4-6-1	24	GSGTEY	EBEABB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	21	QASQDISDYLI	BBABBAEABBB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	17	YDASTLET	BLEABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	85.7	L3	9	L3-9-cis7-1	25	QQYDDlPYT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	66.7	L4	6	L4-6-*	-1	GSGTEY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022