PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1BJM

#CDRs = 4; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV1-44*01	91.2	Hu_IGLV1-44*01	76.9	L1	13	L1-13-*	-1	SGSSSNIGENSVT	BBBAABABLBBBB
A	lambda	Homo.sapiens	Hu_IGLV1-44*01	91.2	Hu_IGLV1-44*01	50.0	L2	8	L2-8-1	14	YEDNSRAS	BLEABBBB
A	lambda	Homo.sapiens	Hu_IGLV1-44*01	91.2	Hu_IGLV1-44*01	77.8	L3	11	L3-11-*	-1	AAWDDSLDVAV	BBBLABBLBBB
A	lambda	Homo.sapiens	Hu_IGLV1-44*01	91.2	Hu_IGLV1-44*01	100.0	L4	6	L4-6-2	34	KSGTSA	BAEABB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	91.2	Hu_IGLV1-44*01	76.9	L1	13	L1-13-1	15	SGSSSNIGENSVT	BBBAAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	91.2	Hu_IGLV1-44*01	50.0	L2	8	L2-8-1	11	YEDNSRAS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	91.2	Hu_IGLV1-44*01	77.8	L3	11	L3-11-1	14	AAWDDSLDVAV	BBBBAAALBBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	91.2	Hu_IGLV1-44*01	100.0	L4	6	L4-6-2	9	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022