PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1BGX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3-2*02	95.9	Mo_IGHV3-2*02	100.0	H1	14	H1-14-*	-1	TVTGYSITsDYAWN	BBBEBBAAABEBBB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	95.9	Mo_IGHV3-2*02	66.7	H2	9	H2-9-*	-1	YITYSGTTD	BBBAABALB
H	heavy	Mus.musculus	Mo_IGHV3-2*02	95.9	Mo_IGHV3-2*02	100.0	H3	12	H3-12-*	-1	ARYYYGYWYFDV	BBBAELBBBBAA
H	heavy	Mus.musculus	Mo_IGHV3-2*02	95.9	Mo_IGHV3-2*02	100.0	H4	8	H4-8-1	14	RDTSKNQF	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	95.7	Mo_IGKV4-55*01	100.0	L1	10	L1-10-*	-1	SASSSVSYMY	BBABBBBEBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	95.7	Mo_IGKV4-55*01	75.0	L2	8	L2-8-*	-1	YDSTNLAS	BBEABBBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	95.7	Mo_IGKV4-55*01	75.0	L3	9	L3-9-cis7-*	-1	QQWSTYPLT	BBAABBAEB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	95.7	Mo_IGKV4-55*01	100.0	L4	6	L4-6-1	19	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022