PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1B4J

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Mo_IGHV1S72*01	93.4	Mo_IGHV1S72*01	69.2	H1	13	H1-13-*	-1	LASGYIFTSSWIN	BBALAEBAABBBB
H	heavy	Homo.sapiens	Mo_IGHV1S72*01	93.4	Mo_IGHV1S72*01	80.0	H2	10	H2-10-1	29	RIDPSDGEVH	BBBBAALBBB
H	heavy	Homo.sapiens	Mo_IGHV1S72*01	93.4	Mo_IGHV1S72*01	0.0	H3	10	H3-10-*	-1	ARGFLPWFAD	BBBABABBAB
H	heavy	Homo.sapiens	Mo_IGHV1S72*01	93.4	Mo_IGHV1S72*01	100.0	H4	8	H4-8-*	-1	VDKSSSTA	BBAABBBB
L	kappa	Homo.sapiens	Mo_IGKV6-20*01	95.7	Mo_IGKV6-20*01	90.9	L1	11	L1-11-*	-1	KASENVDTYVS	BBABBALLABB
L	kappa	Homo.sapiens	Mo_IGKV6-20*01	95.7	Mo_IGKV6-20*01	100.0	L2	8	L2-8-4	28	YGASNRYT	BEABBBBB
L	kappa	Homo.sapiens	Mo_IGKV6-20*01	95.7	Mo_IGKV6-20*01	85.7	L3	9	L3-9-cis7-*	-1	GQSYNYPFT	BBBABBbBB
L	kappa	Homo.sapiens	Mo_IGKV6-20*01	95.7	Mo_IGKV6-20*01	100.0	L4	6	L4-6-3	22	GSATDF	EAAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022