PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1B2W

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus.Homo.sapiens	Hu_IGHV3-33*03	80.8	Mo_IGHV1S72*01	69.2	H1	13	H1-13-*	-1	LASGYIFTSSWIN	BBBAAAABABBBB
H	heavy	Mus.musculus.Homo.sapiens	Hu_IGHV3-33*03	80.8	Mo_IGHV1S72*01	80.0	H2	10	H2-10-1	18	RIDPSDGEVH	BBBAAALBBB
H	heavy	Mus.musculus.Homo.sapiens	Hu_IGHV3-33*03	80.8	Hu_IGHV3-33*03	50.0	H3	10	H3-10-*	-1	ARGFLPWFAD	BBBBEABBAB
H	heavy	Mus.musculus.Homo.sapiens	Hu_IGHV3-33*03	80.8	Hu_IGHV3-33*03	87.5	H4	8	H4-8-1	20	RDKSKNTL	BBAAALBB
L	kappa	Mus.musculus.Homo.sapiens	Hu_IGKV1-5*03	98.6	Mo_IGKV6-20*01	90.9	L1	11	L1-11-*	-1	KASENVDTYVS	BBABBBAABBB
L	kappa	Mus.musculus.Homo.sapiens	Hu_IGKV1-5*03	98.6	Mo_IGKV6-20*01	100.0	L2	8	L2-8-4	18	YGASNRYT	BEAABBBB
L	kappa	Mus.musculus.Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	28.6	L3	9	L3-9-cis7-1	18	GQSYNYPFT	BBAABBbBB
L	kappa	Mus.musculus.Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	83.3	L4	6	L4-6-1	13	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022