PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1AQK

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	95.9	Hu_IGHV3-30*01	76.9	H1	13	H1-13-1	7	AASGFTFNNYAIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	95.9	Hu_IGHV3-30*01	70.0	H2	10	H2-10-2	12	FISYDGSKNY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	95.9	Hu_IGHV3-30*01	100.0	H3	16	H3-16-*	-1	ARVLFQQlvLYAPFDI
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	95.9	Hu_IGHV3-30*01	100.0	H4	8	H4-8-1	23	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	97.1	Hu_IGLV1-40*01	78.6	L1	14	L1-14-3	12	TGSNSNIGAGfTVH	BBBAAAAAALBBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	97.1	Hu_IGLV1-40*01	62.5	L2	8	L2-8-1	12	FANTNRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	97.1	Hu_IGLV1-40*01	88.9	L3	10	L3-10-*	-1	QSYDSSLSAR	BBBBAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	97.1	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	14	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022