PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1A6V

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S65*01	100.0	Mo_IGHV1S65*01	100.0	H1	13	H1-13-1	13	KASGYTFTSYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S65*01	100.0	Mo_IGHV1S65*01	100.0	H2	10	H2-10-1	19	RIDPNSGGTK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S65*01	100.0	Mo_IGHV1S65*01	0.0	H3	13	H3-13-*	-1	ARYDYYGSSYFDY	BBBBAABALBBAB
H	heavy	Mus.musculus	Mo_IGHV1S65*01	100.0	Mo_IGHV1S65*01	100.0	H4	8	H4-8-1	10	VDKPSSTA	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV1S65*01	100.0	Mo_IGHV1S65*01	100.0	H1	13	H1-13-1	13	KASGYTFTSYWMH	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV1S65*01	100.0	Mo_IGHV1S65*01	100.0	H2	10	H2-10-1	10	RIDPNSGGTK	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV1S65*01	100.0	Mo_IGHV1S65*01	0.0	H3	13	H3-13-*	-1	ARYDYYGSSYFDY	BBBBAABALBBAB
I	heavy	Mus.musculus	Mo_IGHV1S65*01	100.0	Mo_IGHV1S65*01	100.0	H4	8	H4-8-1	9	VDKPSSTA	BBAAALBB
J	heavy	Mus.musculus	Mo_IGHV1S65*01	100.0	Mo_IGHV1S65*01	100.0	H1	13	H1-13-*	-1	KASGYTFTSYWMH	BBBLBBLBEEBBB
J	heavy	Mus.musculus	Mo_IGHV1S65*01	100.0	Mo_IGHV1S65*01	100.0	H2	10	H2-10-*	-1	RIDPNSGGTK	BBBABLEBBB
J	heavy	Mus.musculus	Mo_IGHV1S65*01	100.0	Mo_IGHV1S65*01	0.0	H3	13	H3-13-*	-1	ARYDYYGSSYFDY	BBBBABEALBBAB
J	heavy	Mus.musculus	Mo_IGHV1S65*01	100.0	Mo_IGHV1S65*01	100.0	H4	8	H4-8-1	21	VDKPSSTA	BBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L1	14	L1-14-1	16	RSSTGAVTtSNYAN	BBAABBBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L2	8	L2-8-1	13	GGTNNRAP	BLEABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	87.5	L3	9	L3-9-4	19	ALWYSNHWV	BBBBEABBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	83.3	L4	6	L4-6-2	16	LIGNKA	BBEABB
M	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L1	14	L1-14-1	12	RSSTGAVTtSNYAN	BBAAEBBBAAALBB
M	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L2	8	L2-8-1	11	GGTNNRAP	BLLABBBB
M	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	87.5	L3	9	L3-9-4	18	ALWYSNHWV	BBBBLABBB
M	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	83.3	L4	6	L4-6-2	18	LIGNKA	BBEABB
N	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L1	14	L1-14-1	22	RSSTGAVTtSNYAN	BBAABBBBAAALBB
N	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L2	8	L2-8-1	21	GGTNNRAP	BLLABBBB
N	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	87.5	L3	9	L3-9-4	16	ALWYSNHWV	BBBBLABBB
N	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	83.3	L4	6	L4-6-2	14	LIGNKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022