PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1A3R

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	76.9	H1	13	H1-13-*	-1	TTSGFNIKDIYIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	80.0	H2	10	H2-10-1	13	RLDPANGYTK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	0.0	H3	11	H3-11-*	-1	DGYYSYYDMDY	BBBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	87.5	H4	8	H4-8-1	6	VDTSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV8-19*01	92.8	Mo_IGKV8-19*01	88.2	L1	17	L1-17-1	6	KSSQSLlnsrtqKNYLT	BBABBABBAAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV8-19*01	92.8	Mo_IGKV8-19*01	100.0	L2	8	L2-8-1	7	YWASTRES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV8-19*01	92.8	Mo_IGKV8-19*01	71.4	L3	9	L3-9-cis7-1	23	QNNYNYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV8-19*01	92.8	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022