PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1A0Q

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S53*01	95.9	Mo_IGHV1S53*01	92.3	H1	13	H1-13-1	13	KASGYTFTDHVIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S53*01	95.9	Mo_IGHV1S53*01	100.0	H2	10	H2-10-3	16	YISPGNGDIK	BBBBEALBBB
H	heavy	Mus.musculus	Mo_IGHV1S53*01	95.9	Mo_IGHV1S53*01	100.0	H3	12	H3-12-*	-1	KRGYYgrsnVDY
H	heavy	Mus.musculus	Mo_IGHV1S53*01	95.9	Mo_IGHV1S53*01	100.0	H4	8	H4-8-1	10	ADKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV19-93*01	94.2	Mo_IGKV19-93*01	81.8	L1	11	L1-11-2	9	KASQDIKKYIG	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV19-93*01	94.2	Mo_IGKV19-93*01	87.5	L2	8	L2-8-1	9	HYTSTLLP	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV19-93*01	94.2	Mo_IGKV19-93*01	71.4	L3	8	L3-8-1	6	LQYYNLRT	BBAABEBB
L	kappa	Mus.musculus	Mo_IGKV19-93*01	94.2	Mo_IGKV19-93*01	100.0	L4	6	L4-6-1	8	GSGRDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022