PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6P60

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	CDRLenMismatch	-1.0	H1	14	H1-14-2	8	AVTGGSISDaYYWS	BBBLEBAABBBBBB
A	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	CDRLenMismatch	-1.0	H2	10	H2-10-1	7	YIYGSTGGTR	BBBAAALBBB
A	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	Hu_IGHV4-59*06	0.0	H3	14	H3-14-*	-1	VRDGVATIETTGDH	BBBBBBBAABAEBB
A	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	Hu_IGHV4-59*06	87.5	H4	8	H4-8-1	11	IDTSKNQF	BBAAALBB
B	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	CDRLenMismatch	-1.0	L1	13	L1-13-1	9	TGSNSNIGVNYVQ	BBBAAAAAABBBB
B	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	Hu_IGLV1-40*01	62.5	L2	8	L2-8-1	12	YENNKRPS	BLLABBBB
B	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	Hu_IGLV1-40*01	55.6	L3	11	L3-11-1	7	QCYDISLGAHV	BBBBAAALBBB
B	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	Hu_IGLV1-40*01	83.3	L4	6	L4-6-2	11	QSGTSA	BBEABB
C	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	CDRLenMismatch	-1.0	H1	14	H1-14-2	8	AVTGGSISDaYYWS	BBBLEBAABBBBBB
C	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	CDRLenMismatch	-1.0	H2	10	H2-10-1	8	YIYGSTGGTR	BBBAAALBBB
C	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	Hu_IGHV4-59*06	0.0	H3	14	H3-14-*	-1	VRDGVATIETTGDH	BBBBBBBAABAEBB
C	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	Hu_IGHV4-59*06	87.5	H4	8	H4-8-1	11	IDTSKNQF	BBAAALBB
D	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	CDRLenMismatch	-1.0	L1	13	L1-13-1	9	TGSNSNIGVNYVQ	BBBAAAAAABBBB
D	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	Hu_IGLV1-40*01	62.5	L2	8	L2-8-1	11	YENNKRPS	BLLABBBB
D	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	Hu_IGLV1-40*01	55.6	L3	11	L3-11-1	7	QCYDISLGAHV	BBBBAAALBBB
D	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	Hu_IGLV1-40*01	83.3	L4	6	L4-6-2	10	QSGTSA	BBEABB
G	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	CDRLenMismatch	-1.0	H1	14	H1-14-2	8	AVTGGSISDaYYWS	BBBLEBAABBBBBB
G	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	CDRLenMismatch	-1.0	H2	10	H2-10-1	7	YIYGSTGGTR	BBBAAALBBB
G	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	Hu_IGHV4-59*06	0.0	H3	14	H3-14-*	-1	VRDGVATIETTGDH	BBBBBBBAABAEBB
G	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	Hu_IGHV4-59*06	87.5	H4	8	H4-8-1	11	IDTSKNQF	BBAAALBB
H	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	CDRLenMismatch	-1.0	L1	13	L1-13-1	8	TGSNSNIGVNYVQ	BBBAAAAAABBBB
H	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	Hu_IGLV1-40*01	62.5	L2	8	L2-8-1	11	YENNKRPS	BLLABBBB
H	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	Hu_IGLV1-40*01	55.6	L3	11	L3-11-1	7	QCYDISLGAHV	BBBBAAALBBB
H	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	Hu_IGLV1-40*01	83.3	L4	6	L4-6-2	12	QSGTSA	BBEABB
J	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	CDRLenMismatch	-1.0	H1	14	H1-14-2	8	AVTGGSISDaYYWS	BBBLEBAABBBBBB
J	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	CDRLenMismatch	-1.0	H2	10	H2-10-1	7	YIYGSTGGTR	BBBAAALBBB
J	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	Hu_IGHV4-59*06	0.0	H3	14	H3-14-*	-1	VRDGVATIETTGDH	BBBBBBBAABAEBB
J	heavy	Platyrrhini	Hu_IGHV4-59*06	89.0	Hu_IGHV4-59*06	87.5	H4	8	H4-8-1	11	IDTSKNQF	BBAAALBB
K	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	CDRLenMismatch	-1.0	L1	13	L1-13-1	9	TGSNSNIGVNYVQ	BBBAAAAAABBBB
K	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	Hu_IGLV1-40*01	62.5	L2	8	L2-8-1	12	YENNKRPS	BLLABBBB
K	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	Hu_IGLV1-40*01	55.6	L3	11	L3-11-1	7	QCYDISLGAHV	BBBBAAALBBB
K	lambda	Platyrrhini	Hu_IGLV1-40*01	89.7	Hu_IGLV1-40*01	83.3	L4	6	L4-6-2	12	QSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022