PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5WCC

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	69.2	H1	13	H1-13-1	16	SASEFTVSGNYMT	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	77.8	H2	9	H2-9-1	6	IIYTGGSTY	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	100.0	H3	18	H3-18-*	-1	ARALklqffdwpSHAFDI
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	75.0	H4	8	H4-8-1	6	RDDSRNTL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV2-8*01	78.6	L1	14	L1-14-2	13	TGTRSDIdGYNYVS	BBBAAAAAABABBB
B	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV2-8*01	75.0	L2	8	L2-8-1	10	SEVNKRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV2-8*01	66.7	L3	11	L3-11-*	-1	SSYTDTNNFYV	BBBBABABABB
B	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV2-8*01	83.3	L4	6	L4-6-2	13	KSGNRA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	69.2	H1	13	H1-13-1	16	SASEFTVSGNYMT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	77.8	H2	9	H2-9-1	8	IIYTGGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	100.0	H3	18	H3-18-*	-1	ARALKLQffdwPSHAFDI
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	75.0	H4	8	H4-8-1	8	RDDSRNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV2-8*01	78.6	L1	14	L1-14-*	-1	TGTrsdidgYNYVS
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV2-8*01	75.0	L2	8	L2-8-4	7	SEVNKRPS	BEAABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV2-8*01	66.7	L3	11	L3-11-*	-1	SSYTDTNNFYV	BBBBABABABB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV2-8*01	83.3	L4	6	L4-6-2	14	KSGNRA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022