PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2XQY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Mus.musculus	Mo_IGHV1S72*01	91.8	Mo_IGHV1S72*01	92.3	H1	13	H1-13-1	8	KASGYSFTSYWMN	BBBLBBAAABBBB
G	heavy	Mus.musculus	Mo_IGHV1S72*01	91.8	Mo_IGHV1S72*01	90.0	H2	10	H2-10-1	9	RIDPSDNETH	BBBAAALBBB
G	heavy	Mus.musculus	Mo_IGHV1S72*01	91.8	Mo_IGHV1S72*01	0.0	H3	11	H3-11-1	11	GRLGYVYGFDY	BBBBAALBBAB
G	heavy	Mus.musculus	Mo_IGHV1S72*01	91.8	Mo_IGHV1S72*01	87.5	H4	8	H4-8-1	7	VDKSSSTV	BBAAALBB
J	heavy	Mus.musculus	Mo_IGHV1S72*01	91.8	Mo_IGHV1S72*01	92.3	H1	13	H1-13-1	8	KASGYSFTSYWMN	BBBLBBAAABBBB
J	heavy	Mus.musculus	Mo_IGHV1S72*01	91.8	Mo_IGHV1S72*01	90.0	H2	10	H2-10-1	9	RIDPSDNETH	BBBAAALBBB
J	heavy	Mus.musculus	Mo_IGHV1S72*01	91.8	Mo_IGHV1S72*01	0.0	H3	11	H3-11-1	11	GRLGYVYGFDY	BBBBAALBBAB
J	heavy	Mus.musculus	Mo_IGHV1S72*01	91.8	Mo_IGHV1S72*01	87.5	H4	8	H4-8-1	6	VDKSSSTV	BBAAALBB
K	kappa	Mus.musculus	Mo_IGKV3-12*01	98.6	Mo_IGKV3-12*01	93.3	L1	15	L1-15-1	7	RASKSVStsgySYMY	BBABBABBLLBBBBB
K	kappa	Mus.musculus	Mo_IGKV3-12*01	98.6	Mo_IGKV3-12*01	100.0	L2	8	L2-8-1	5	YLASNLES	BLLABBBB
K	kappa	Mus.musculus	Mo_IGKV3-12*01	98.6	Mo_IGKV3-12*01	100.0	L3	9	L3-9-cis7-1	10	QHSRELPWT	BBAABBbBB
K	kappa	Mus.musculus	Mo_IGKV3-12*01	98.6	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	98.6	Mo_IGKV3-12*01	93.3	L1	15	L1-15-1	6	RASKSVStsgySYMY	BBABBABBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	98.6	Mo_IGKV3-12*01	100.0	L2	8	L2-8-1	6	YLASNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	98.6	Mo_IGKV3-12*01	100.0	L3	9	L3-9-cis7-1	11	QHSRELPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	98.6	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022