PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7REW

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H1	13	H1-13-1	8	AASGFTFSSYAMS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	60.0	H2	10	H2-10-*	-1	AFSGWDVSTY	BBBAABABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	0.0	H3	16	H3-16-*	-1	VQDGLgpYFYNYGMDV
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	81.8	L1	11	L1-11-3	9	SGDKLGDKYSF	BBBLAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	12	YHDSKRPS	BLLABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	87.5	L3	9	L3-9-1	8	QAWDSSTYV	BBBBLLBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	83.3	L4	6	L4-6-2	16	NSGDTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYAMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	60.0	H2	10	H2-10-*	-1	AFSGWDVSTY	BBBAABABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	0.0	H3	16	H3-16-*	-1	VQDGLgpYFYNYGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	81.8	L1	11	L1-11-3	6	SGDKLGDKYSF	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	7	YHDSKRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	87.5	L3	9	L3-9-1	9	QAWDSSTYV	BBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	83.3	L4	6	L4-6-2	13	NSGDTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022