PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7N4J

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-39*02	94.5	Hu_IGHV4-39*02	73.3	H1	15	H1-15-2	13	SVSGDSISssDYSWG	BBBLBBAABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*02	94.5	Hu_IGHV4-39*02	55.6	H2	9	H2-9-*	-1	TIYYIKNTY	BBBLLABBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*02	94.5	Hu_IGHV4-39*02	100.0	H3	23	H3-23-*	-1	ARERppfdvvvvpAARPYNWFDP
H	heavy	Homo.sapiens	Hu_IGHV4-39*02	94.5	Hu_IGHV4-39*02	87.5	H4	8	H4-8-1	10	VDTSKNLF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	97.1	Hu_IGLV1-40*01	100.0	L1	14	L1-14-3	6	TGSSSNIGAgYDVH	BBBAAAAAALBBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	97.1	Hu_IGLV1-40*01	87.5	L2	8	L2-8-1	8	YGNNNRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	97.1	Hu_IGLV1-40*01	100.0	L3	12	L3-12-*	-1	QSYDSSLSgSKV
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	97.1	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	12	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022