PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5EOR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Hu_IGHV4-59*07	64.4	Hu_IGHV4-59*07	53.8	H1	13	H1-13-1	14	TVSGLSLTSYGVH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Hu_IGHV4-59*07	64.4	Hu_IGHV4-59*07	33.3	H2	9	H2-9-1	9	VIWSGGNTD	BBBAALBBB
H	heavy	Mus.musculus	Hu_IGHV4-59*07	64.4	Hu_IGHV4-59*07	50.0	H3	9	H3-9-*	-1	AIYYRYGAY	BBBBBbEBB
H	heavy	Mus.musculus	Hu_IGHV4-59*07	64.4	Hu_IGHV4-59*07	62.5	H4	8	H4-8-1	7	KDNSKNQV	BBAAALBB
L	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	66.7	L1	12	L1-12-*	-1	TLSSQHSTYTID	BBBAAAAABBBB
L	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	58.3	L2	12	L2-12-2	5	ElrrdGSHNTGD	BBBAALBBBBBB
L	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	L3	13	L3-13-*	-1	GVGDTIKEQfvYV	BBBBBBLLBBBBB
L	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	83.3	L4	6	L4-6-2	18	SSGADR	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022