PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5DFW

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV14-3*02	79.5	Mo_IGHV14-3*02	69.2	H1	13	H1-13-*	-1	TTSGFNFKDSYLH	BAELBBAABBBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	79.5	Mo_IGHV14-3*02	70.0	H2	10	H2-10-1	9	RIDTGNGNVK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	79.5	Mo_IGHV14-3*02	0.0	H3	9	H3-9-*	-1	VPYGYGFHS	BBBEBEBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	79.5	Mo_IGHV14-3*02	50.0	H4	8	H4-8-1	9	TDIPSMTA	BBAAALBB
H	kappa	Mus.musculus	Mo_IGKV12-46*01	94.2	Mo_IGKV12-46*01	81.8	L1	11	L1-11-2	9	RASENIYRTLA	BBABBALLBBB
H	kappa	Mus.musculus	Mo_IGKV12-46*01	94.2	Mo_IGKV12-46*01	75.0	L2	8	L2-8-4	14	YGATTLAD	BEAABBBB
H	kappa	Mus.musculus	Mo_IGKV12-46*01	94.2	Mo_IGKV12-46*01	100.0	L3	9	L3-9-cis7-2	8	QHFWGTPWT	BBABEBbBB
H	kappa	Mus.musculus	Mo_IGKV12-46*01	94.2	Mo_IGKV12-46*01	100.0	L4	6	L4-6-1	8	GSGTQY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022