PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1RHH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.1	Hu_IGKV3-20*01	83.3	L1	12	L1-12-2	4	RASQSVSSgSLA	BBABBBBLLBBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.1	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	7	YGASTRAT	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.1	Hu_IGKV3-20*01	85.7	L3	9	L3-9-cis7-1	5	QQYGTSPYT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV1-69*06	85.7	Hu_IGHV1-69*06	69.2	H1	13	H1-13-*	-1	KASGGTFSMYGFN	BBAALBAEABBBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*06	85.7	Hu_IGHV1-69*06	90.0	H2	10	H2-10-1	18	GIIPIFGTSN	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*06	85.7	Hu_IGHV1-69*06	100.0	H3	24	H3-24-*	-1	ARDfgpdwedgdsYDGSGRGFFDF
B	heavy	Homo.sapiens	Hu_IGHV1-69*06	85.7	Hu_IGHV1-69*06	75.0	H4	8	H4-8-1	8	ADQATSTA	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.1	Hu_IGKV3-20*01	83.3	L1	12	L1-12-2	4	RASQSVSSgSLA	BBABBBBLLBBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.1	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	7	YGASTRAT	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.1	Hu_IGKV3-20*01	85.7	L3	9	L3-9-cis7-1	7	QQYGTSPYT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV1-69*06	85.7	Hu_IGHV1-69*06	69.2	H1	13	H1-13-*	-1	KASGGTFSMYGFN	BBBLLBAEABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*06	85.7	Hu_IGHV1-69*06	90.0	H2	10	H2-10-1	19	GIIPIFGTSN	BBBAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*06	85.7	Hu_IGHV1-69*06	100.0	H3	24	H3-24-*	-1	ARDfgpdwedgdsYDGSGRGFFDF
D	heavy	Homo.sapiens	Hu_IGHV1-69*06	85.7	Hu_IGHV1-69*06	75.0	H4	8	H4-8-1	9	ADQATSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022