PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 8CYJ

#CDRs = 4; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	89.0	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	ALSGYTFSIFPTA	BBBLBBBAABBBB
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	89.0	CDRLenMismatch	-1.0	H2	13	H2-13-*	-1	GIRWNGStrdYTE
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	89.0	La_IGHV1S3*01_VHH	50.0	H3	17	H3-17-*	-1	AASDGVidgTNANAYRY
A	heavy	Lama.glama	La_IGHV1S3*01_VHH	89.0	La_IGHV1S3*01_VHH	87.5	H4	8	H4-8-1	12	RDNAKNMV	BBAAALBB
B	heavy	Lama.glama	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-*	-1	ATSGRTFSTYRMS	BBBBBLAAABBBB
B	heavy	Lama.glama	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	60.0	H2	10	H2-10-1	13	TIIWSVGSTH	BBBAAALBBB
B	heavy	Lama.glama	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	100.0	H3	18	H3-18-*	-1	AAQRSDSSSWgyedDYDY
B	heavy	Lama.glama	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	87.5	H4	8	H4-8-1	10	RDNAKNMV	BBAAALBB
C	heavy	Lama.glama	La_IGHV1S6*01	89.0	La_IGHV1S6*01	76.9	H1	13	H1-13-1	7	AASGFTFNRYAMS	BBBLBBAAABBBB
C	heavy	Lama.glama	La_IGHV1S6*01	89.0	La_IGHV1S6*01	60.0	H2	10	H2-10-2	8	GIYSDGSETY	BBBAALABBB
C	heavy	Lama.glama	La_IGHV1S6*01	89.0	La_IGHV1S6*01	50.0	H3	21	H3-21-*	-1	AKDENAHEDYfnsgfdrKYDY
C	heavy	Lama.glama	La_IGHV1S6*01	89.0	La_IGHV1S6*01	75.0	H4	8	H4-8-1	5	RDNAKNML	BBAAALBB
D	heavy	Lama.glama	La_IGHV1S1*01_VHH	90.4	La_IGHV1S1*01_VHH	53.8	H1	13	H1-13-*	-1	AASGRTFSTYAMA	BBBEBBAAABBBB
D	heavy	Lama.glama	La_IGHV1S1*01_VHH	90.4	La_IGHV1S1*01_VHH	30.0	H2	10	H2-10-2	18	GVARSADTTY	BBBAALABBB
D	heavy	Lama.glama	La_IGHV1S1*01_VHH	90.4	La_IGHV1S1*01_VHH	100.0	H3	20	H3-20-*	-1	AARSVIQYgivpgnDFHYEY
D	heavy	Lama.glama	La_IGHV1S1*01_VHH	90.4	La_IGHV1S1*01_VHH	87.5	H4	8	H4-8-1	11	RDNAKNEV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022