PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XW4

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	76.9	H1	13	H1-13-*	-1	AKSGRTFRAYAMG	BBBEBBABBBBBB
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	11	AIDWSAAITN	BBBAALABBB
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AATYSTiAPRTSYDF
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	50.0	H4	8	H4-8-*	-1	RDKGMNTA	BBBLBABB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	76.9	H1	13	H1-13-*	-1	AKSGRTFRAYAMG	BBBEBBABBBBBB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-2	11	AIDWSAAITN	BBBAALABBB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	100.0	H3	15	H3-15-*	-1	AATYSTiAPRTSYDF
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	90.4	Al_IGHV3-3*01_VHH	50.0	H4	8	H4-8-*	-1	RDKGMNTA	BBBLBABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022