PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7K7R

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV2-30*01	92.8	Hu_IGKV2-30*01	93.8	L1	16	L1-16-*	-1	RSSQSLvysdgRTYLN	BBABALBBAALBBBBB
A	kappa	Homo.sapiens	Hu_IGKV2-30*01	92.8	Hu_IGKV2-30*01	75.0	L2	8	L2-8-*	-1	YKISKRDS	BLEABBBA
A	kappa	Homo.sapiens	Hu_IGKV2-30*01	92.8	Hu_IGKV2-30*01	85.7	L3	9	L3-9-cis7-1	11	MQGSHWPVT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV2-30*01	92.8	Hu_IGKV2-30*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	87.7	Hu_IGHV3-7*01	76.9	H1	13	H1-13-1	9	VSSGFTFSNYWMS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	87.7	Hu_IGHV3-7*01	90.0	H2	10	H2-10-2	8	NINQDGSEKY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	87.7	Hu_IGHV3-7*01	50.0	H3	9	H3-9-*	-1	TRDPPYFDN	BBLBaALAB
B	heavy	Homo.sapiens	Hu_IGHV3-7*01	87.7	Hu_IGHV3-7*01	87.5	H4	8	H4-8-1	11	RDNTKNSL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV2-30*01	92.8	Hu_IGKV2-30*01	93.8	L1	16	L1-16-*	-1	RSSQSLvysdgRTYLN	BBABALBBAALBBBBB
D	kappa	Homo.sapiens	Hu_IGKV2-30*01	92.8	Hu_IGKV2-30*01	75.0	L2	8	L2-8-*	-1	YKISKRDS	BLEABBBA
D	kappa	Homo.sapiens	Hu_IGKV2-30*01	92.8	Hu_IGKV2-30*01	85.7	L3	9	L3-9-cis7-1	11	MQGSHWPVT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV2-30*01	92.8	Hu_IGKV2-30*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-7*01	87.7	Hu_IGHV3-7*01	76.9	H1	13	H1-13-1	9	VSSGFTFSNYWMS	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-7*01	87.7	Hu_IGHV3-7*01	90.0	H2	10	H2-10-2	8	NINQDGSEKY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-7*01	87.7	Hu_IGHV3-7*01	50.0	H3	9	H3-9-*	-1	TRDPPYFDN	BBLBaALAB
E	heavy	Homo.sapiens	Hu_IGHV3-7*01	87.7	Hu_IGHV3-7*01	87.5	H4	8	H4-8-1	11	RDNTKNSL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022