PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3U0W

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV4-1*02	97.3	Mo_IGHV4-1*02	92.3	H1	13	H1-13-1	7	AASGFDFSRYWMN	BBBLBBAAABBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV4-1*02	97.3	Mo_IGHV4-1*02	100.0	H2	10	H2-10-2	11	EINPDSSTIN	BBBAALABBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV4-1*02	97.3	Mo_IGHV4-1*02	100.0	H3	6	H3-6-1	9	ARQMGY	BBEAAB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV4-1*02	97.3	Mo_IGHV4-1*02	100.0	H4	8	H4-8-1	7	RDNAKNTL	BBAAALBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV10-94*01	98.6	Mo_IGKV10-94*01	100.0	L1	11	L1-11-2	8	SASQGISNYLN	BBABBALLBBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV10-94*01	98.6	Mo_IGKV10-94*01	100.0	L2	8	L2-8-1	4	YYTSSLHS	BLLABBBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV10-94*01	98.6	Mo_IGKV10-94*01	85.7	L3	9	L3-9-cis7-1	7	QQYRKLPYT	BBAABBbBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV10-94*01	98.6	Mo_IGKV10-94*01	100.0	L4	6	L4-6-1	12	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022