PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3MUG

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	71.4	L1	14	L1-14-2	6	NGTSSDVGGfDSVS	BBBAAAAAABBABB
A	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	11	FDVSHRPS	BLEABBBB
A	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	44.4	L3	10	L3-10-1	12	SSLTDRSHRI	BBBBAALBBB
A	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	3	KSGNTA	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	69.2	H1	13	H1-13-1	8	LASGFTFHKYGMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	60.0	H2	10	H2-10-2	7	LISDDGMRKY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H3	30	H3-30-*	-1	AREaggpiwhddvkyydfnDGYYNYHYMDV
B	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	71.4	L1	14	L1-14-*	-1	NGTSSDVGGfDSVS	BBBAAAAAABABBB
C	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	12	FDVSHRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	44.4	L3	10	L3-10-1	12	SSLTDRSHRI	BBBBAALBBB
C	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	4	KSGNTA	BBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	69.2	H1	13	H1-13-1	8	LASGFTFHKYGMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	60.0	H2	10	H2-10-2	13	LISDDGMRKY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H3	30	H3-30-*	-1	AREaggpiwhddvkyydfnDGYYNYHYMDV
D	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
E	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	71.4	L1	14	L1-14-2	6	NGTSSDVGGfDSVS	BBBAAAAAABBABB
E	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	10	FDVSHRPS	BLEABBBB
E	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	44.4	L3	10	L3-10-1	11	SSLTDRSHRI	BBBBAALBBB
E	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	3	KSGNTA	BBEABB
F	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	69.2	H1	13	H1-13-1	8	LASGFTFHKYGMH	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	60.0	H2	10	H2-10-2	8	LISDDGMRKY	BBBAALABBB
F	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H3	30	H3-30-*	-1	AREaggpiwhddvkyydfnDGYYNYHYMDV
F	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
G	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	71.4	L1	14	L1-14-2	6	NGTSSDVGGfDSVS	BBBAAAAAABBABB
G	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	11	FDVSHRPS	BLEABBBB
G	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	44.4	L3	10	L3-10-1	12	SSLTDRSHRI	BBBBAALBBB
G	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	3	KSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	69.2	H1	13	H1-13-1	7	LASGFTFHKYGMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	60.0	H2	10	H2-10-2	7	LISDDGMRKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H3	30	H3-30-*	-1	AREaggpiwhddvkyydfnDGYYNYHYMDV
H	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
I	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	71.4	L1	14	L1-14-2	6	NGTSSDVGGfDSVS	BBBAAAAAABBABB
I	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	10	FDVSHRPS	BLEABBBB
I	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	44.4	L3	10	L3-10-1	11	SSLTDRSHRI	BBBBAALBBB
I	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	3	KSGNTA	BBEABB
J	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	69.2	H1	13	H1-13-1	8	LASGFTFHKYGMH	BBBLBBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	60.0	H2	10	H2-10-2	9	LISDDGMRKY	BBBAALABBB
J	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H3	30	H3-30-*	-1	AREaggpiwhddvkyydfnDGYYNYHYMDV
J	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
K	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	71.4	L1	14	L1-14-2	6	NGTSSDVGGfDSVS	BBBAAAAAABBABB
K	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	10	FDVSHRPS	BLEABBBB
K	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	44.4	L3	10	L3-10-1	11	SSLTDRSHRI	BBBBAALBBB
K	lambda	Homo.sapiens	Hu_IGLV2-14*01	86.8	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	3	KSGNTA	BBEABB
L	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	69.2	H1	13	H1-13-1	6	LASGFTFHKYGMH	BBBLBBAAABBBB
L	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	60.0	H2	10	H2-10-2	7	LISDDGMRKY	BBBAALABBB
L	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H3	30	H3-30-*	-1	AREaggpiwhddvkyydfnDGYYNYHYMDV
L	heavy	Homo.sapiens	Hu_IGHV3-30*15	82.2	Hu_IGHV3-30*15	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022