PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 8FAB

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	72.7	L1	11	L1-11-4	10	SANALPNQYAY	BBAAAAABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	75.0	L2	8	L2-8-1	10	YKDTQRPS	BLLABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	33.3	L3	9	L3-9-3	28	QAWDNSASI	BBEBAABBB
A	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	83.3	L4	6	L4-6-2	11	TSGTTV	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	90.3	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	5	IASGFTFSNYGMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	90.3	Hu_IGHV3-33*01	70.0	H2	10	H2-10-2	12	VIWYNGSRTY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	90.3	Hu_IGHV3-33*01	100.0	H3	14	H3-14-*	-1	ARDPDILTAFSFDY	BBBABAAEALBBAB
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	90.3	Hu_IGHV3-33*01	87.5	H4	8	H4-8-1	5	RDNSKRTL	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	72.7	L1	11	L1-11-4	11	SANALPNQYAY	BBAAAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	75.0	L2	8	L2-8-1	7	YKDTQRPS	BLLABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	33.3	L3	9	L3-9-*	-1	QAWDNSASI	BBEBAABBB
C	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	83.3	L4	6	L4-6-2	14	TSGTTV	BBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	90.3	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	7	IASGFTFSNYGMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	90.3	Hu_IGHV3-33*01	70.0	H2	10	H2-10-2	14	VIWYNGSRTY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	90.3	Hu_IGHV3-33*01	100.0	H3	14	H3-14-*	-1	ARDPDILTAFSFDY	BBBABBAABBBBAB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	90.3	Hu_IGHV3-33*01	87.5	H4	8	H4-8-1	8	RDNSKRTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022