PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7ZFD

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	93.2	Hu_IGHV3-9*01	100.0	H1	13	H1-13-1	6	AASGFTFDDYAMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	93.2	Hu_IGHV3-9*01	90.0	H2	10	H2-10-2	9	GISWNSGSIV	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	93.2	Hu_IGHV3-9*01	66.7	H3	16	H3-16-*	-1	AKSTAlrHQYYYGMDV
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	93.2	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	2	RDNAKNSL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	17	RTSQTISSYLN	BBABBAEBABB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	3	YDASSLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	22	QQSYNTPYA	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	83.3	L4	6	L4-6-*	-1	GYGTDF	EBEBLB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	93.2	Hu_IGHV3-9*01	100.0	H1	13	H1-13-1	6	AASGFTFDDYAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	93.2	Hu_IGHV3-9*01	90.0	H2	10	H2-10-2	9	GISWNSGSIV	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	93.2	Hu_IGHV3-9*01	66.7	H3	16	H3-16-*	-1	AKSTAlrHQYYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	93.2	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	2	RDNAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	17	RTSQTISSYLN	BBABBAEBABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	3	YDASSLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	22	QQSYNTPYA	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	83.3	L4	6	L4-6-*	-1	GYGTDF	EBEBLB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022