PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7TE4

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV19-93*01	100.0	Mo_IGKV19-93*01	100.0	L1	11	L1-11-2	7	KASQDINKYIA	BBABBALLBBB
A	kappa	Mus.musculus	Mo_IGKV19-93*01	100.0	Mo_IGKV19-93*01	87.5	L2	8	L2-8-1	10	HYTSSLQP	BLEABBBB
A	kappa	Mus.musculus	Mo_IGKV19-93*01	100.0	Mo_IGKV19-93*01	85.7	L3	8	L3-8-1	8	LQYDNLYT	BBAABEBB
A	kappa	Mus.musculus	Mo_IGKV19-93*01	100.0	Mo_IGKV19-93*01	100.0	L4	6	L4-6-1	9	GSGRDY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV5-12-2*01	95.8	Mo_IGHV5-12-2*01	100.0	H1	13	H1-13-1	10	AASGFTFSSYTMS	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-12-2*01	95.8	Mo_IGHV5-12-2*01	90.0	H2	10	H2-10-*	-1	YISNgggGTY
B	heavy	Mus.musculus	Mo_IGHV5-12-2*01	95.8	Mo_IGHV5-12-2*01	100.0	H3	15	H3-15-*	-1	ARPSRgGSSYWYFDV
B	heavy	Mus.musculus	Mo_IGHV5-12-2*01	95.8	Mo_IGHV5-12-2*01	100.0	H4	8	H4-8-*	-1	RDNAKNTL	BALAALBB
H	heavy	Mus.musculus	Mo_IGHV5-12-2*01	95.8	Mo_IGHV5-12-2*01	100.0	H1	13	H1-13-1	11	AASGFTFSSYTMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-12-2*01	95.8	Mo_IGHV5-12-2*01	90.0	H2	10	H2-10-*	-1	YISNGGGGTY	BBBABAABBB
H	heavy	Mus.musculus	Mo_IGHV5-12-2*01	95.8	Mo_IGHV5-12-2*01	100.0	H3	15	H3-15-*	-1	ARPSRgGSSYWYFDV
H	heavy	Mus.musculus	Mo_IGHV5-12-2*01	95.8	Mo_IGHV5-12-2*01	100.0	H4	8	H4-8-1	7	RDNAKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV19-93*01	100.0	Mo_IGKV19-93*01	100.0	L1	11	L1-11-2	7	KASQDINKYIA	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV19-93*01	100.0	Mo_IGKV19-93*01	87.5	L2	8	L2-8-1	9	HYTSSLQP	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV19-93*01	100.0	Mo_IGKV19-93*01	85.7	L3	8	L3-8-1	8	LQYDNLYT	BBAABEBB
L	kappa	Mus.musculus	Mo_IGKV19-93*01	100.0	Mo_IGKV19-93*01	100.0	L4	6	L4-6-1	9	GSGRDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022