PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDR Structures for L3-5-*

Structures in cluster L3-5-*
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	Sequence	Ramachandran	Distance(°)
L3-5-*	6MPHR	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	QQFEF	BBLAB	-1
L3-5-*	6N1Vh	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	QQFEF	BBBAB	-1
L3-5-*	6N1Vi	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	QQFEF	BBBAB	-1
L3-5-*	6MPHh	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	QQFEF	BBLAB	-1
L3-5-*	6MPHi	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	QQFEF	BBLAB	-1
L3-5-*	6OT1K	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	QQFEF	BBLAB	-1
L3-5-*	6N1VR	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	QQFEF	BBBAB	-1
L3-5-*	6OT1r	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	QQFEF	BBLAB	-1
L3-5-*	6OT1T	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	QQFEF	BBLAB	-1
L3-5-*	6VI0J	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	Hu_IGKV3-20*01	QQYEF	BBBLB	-1
L3-5-*	6VI0L	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	Hu_IGKV3-20*01	QQYEF	BBBLB	-1
L3-5-*	6VI0D	EM	kappa	Homo.sapiens	Hu_IGKV3-20*01	78.8	Hu_IGKV3-20*01	QQYEF	BBBLB	-1
L3-5-*	7PC2H	EM	kappa	Homo.sapiens	Hu_IGKV1-17*02	81.2	Hu_IGKV1-17*02	QVYEF		-1
L3-5-*	7PC2J	EM	kappa	Homo.sapiens	Hu_IGKV1-17*02	81.2	Hu_IGKV1-17*02	QVYEF		-1
L3-5-*	7PC2L	EM	kappa	Homo.sapiens	Hu_IGKV1-17*02	81.2	Hu_IGKV1-17*02	QVYEF		-1
L3-5-*	7S6JL	EM	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	QQPLT	BBAAB	-1
L3-5-*	7S6JD	EM	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	QQPLT	BBAAB	-1
L3-5-*	7S6JG	EM	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	QQPLT	BBAAB	-1
L3-5-*	7KC1K	EM	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	QQSRT	BAAAB	-1
L3-5-*	7KC1F	EM	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	QQSRT	BAAAB	-1
L3-5-*	7KC1L	EM	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	QQSRT	BAAAB	-1

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022