PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDR Structures for L3-13-*

Structures in cluster L3-13-*
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
L3-13-*	7R8OP	EM	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	0.0	GADQGSGSNFvgV	BBBBBLLBAEBBB	-1
L3-13-*	2OTUC	1.68	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBAABBBBB	-1
L3-13-*	2OTWA	2.35	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBAABBBBB	-1
L3-13-*	7R8OL	EM	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	0.0	GADQGSGSNFvgV	BBBBBLLBAEBBB	-1
L3-13-*	2OTUA	1.68	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBAABBBBB	-1
L3-13-*	7R8ON	EM	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	0.0	GADQGSGSNFvgV	BBBBBLLBAEBBB	-1
L3-13-*	2OTWC	2.35	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBAABBBBB	-1
L3-13-*	2OTUE	1.68	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBAABBBBB	-1
L3-13-*	2OTUG	1.68	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBAABBBBB	-1
L3-13-*	7WROL	EM	lambda	Homo.sapiens	Hu_IGLV1-40*01	92.4	Hu_IGLV1-40*01	88.9	QSYDSSLslSAVV	BBBBABBLALBBB	-1
L3-13-*	7M7WL	2.65	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	QSYDSSLSgpNWV	BBBBAABABBBBB	-1
L3-13-*	7M7WB	2.65	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	QSYDSSLSgpNWV	BBBBAABABBBBB	-1
L3-13-*	7JXEL	2.043	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	QSYDSSLsgSEVV		-1
L3-13-*	7R6WL	1.83	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	QSYDSSLsgSEVV	BBBBBBAAEBBBB	-1
L3-13-*	7RA8G	EM	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	QSYDSSLSgpNWV	BBBBABEAEBBBB	-1
L3-13-*	7RA8D	EM	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	QSYDSSLSgpNWV	BBBBABEAEBBBB	-1
L3-13-*	7PQZB	3.2	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	QSYDSSLSgfYVV	BBBBAABBBBBBB	-1
L3-13-*	7RALL	EM	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	QSYDSSLSgpNWV	BBBBABEAEBBBB	-1
L3-13-*	7RA8L	EM	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	QSYDSSLSgpNWV	BBBBABEAEBBBB	-1
L3-13-*	5EORL	2.27	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBLLBBBBB	-1
L3-13-*	5KG9B	2.3	lambda	Mus.musculus.Homo.sapiens	Hu_IGLV4-69*01	76.5	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBABEABBBBB	-1
L3-13-*	5KG9L	2.3	lambda	Mus.musculus.Homo.sapiens	Hu_IGLV4-69*01	76.5	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBEABBBBB	-1
L3-13-*	7MXEW	EM	lambda	Macaca.mulatta	Ma_IGLV4S4*01	70.6	Ma_IGLV4S4*01	0.0	GADHGtgSAFVYV	EBBBEBAAABBBB	-1
L3-13-*	6PCUH	2.4	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	0.0	GADHGSGDNfvRV	BBBBEBEAABBBB	-1
L3-13-*	2GSGA	2.1	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBABLBBBBB	-1
L3-13-*	6PCUB	2.4	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	0.0	GADHGSGDNfvRV	BBBBEBEAABBBB	-1
L3-13-*	2QHRL	2	lambda	Mus.musculus	Hu_IGLV4-69*01	79.4	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBLLBBBBB	-1
L3-13-*	2GSGC	2.1	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBLLBBBBB	-1
L3-13-*	6PCUE	2.4	lambda	Homo.sapiens	Hu_IGLV4-69*01	70.6	Hu_IGLV4-69*01	0.0	GADHGSGDNfvRV	BBBBEBEAABBBB	-1
L3-13-*	3FFDB	2	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBEABBBBB	-1
L3-13-*	3S96B	1.9	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBLLBBBBB	-1
L3-13-*	4ISVA	1.497	lambda	Mus.musculus	Hu_IGLV4-69*01	76.5	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBLLBBBBB	-1
L3-13-*	3S96D	1.9	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBLLBBBBB	-1
L3-13-*	4JJ5A	2.445	lambda	Mus.musculus	Hu_IGLV4-69*01	76.5	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBLLBBBBB	-1
L3-13-*	6F7TA	2.6	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBABLBBBBB	-1
L3-13-*	6LRAL	1.9	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBLLBBBBB	-1
L3-13-*	7FGJL	1.89	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBLLBBBBB	-1
L3-13-*	6F7TL	2.6	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBABLBBBBB	-1
L3-13-*	7FGKL	2.3	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBABLBBBBB	-1
L3-13-*	7FGLL	2.1	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBAALBBBBB	-1
L3-13-*	7FGRL	2.2	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBEABBBBB	-1
L3-13-*	2B0SL	2.3	lambda	Homo.sapiens	Hu_IGLV1-47*01	89.7	Hu_IGLV1-47*01	77.8	AAWDDSRGgpDWV	BBBBAAALBBBBB	-1
L3-13-*	2B1AL	2.348	lambda	Homo.sapiens	Hu_IGLV1-47*01	89.7	Hu_IGLV1-47*01	77.8	AAWDDSRGgpDWV	BBBBAAALBBBBB	-1
L3-13-*	2B1HL	2	lambda	Homo.sapiens	Hu_IGLV1-47*01	89.7	Hu_IGLV1-47*01	77.8	AAWDDSRGgpDWV	BBBBAAALBBBBB	-1
L3-13-*	3MLWL	2.7	lambda	Homo.sapiens	Hu_IGLV1-47*01	97.1	Hu_IGLV1-47*01	66.7	ASWDDSRGgpDYV	BBBBAABABBBBB	-1
L3-13-*	4HF5L	3.004	lambda	Homo.sapiens	Hu_IGLV1-44*01	94.1	Hu_IGLV1-44*01	88.9	AAWDDSLSgpAVV	BBBALBBaBBBBB	-1
L3-13-*	3MLWM	2.7	lambda	Homo.sapiens	Hu_IGLV1-47*01	97.1	Hu_IGLV1-47*01	66.7	ASWDDSRGgpDYV	BBBBAAALBBBBB	-1
L3-13-*	6J6YC	2.15	lambda	Synthetic.construct	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	100.0	AAWDDSLSgpHVV	BBBBBBAAEBBBB	-1
L3-13-*	6J6YF	2.15	lambda	Synthetic.construct	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	100.0	AAWDDSLSgpHVV	BBBBBBAAEBBBB	-1
L3-13-*	7WE9K	EM	lambda	Homo.sapiens	Hu_IGLV1-47*02	95.5	Hu_IGLV1-47*02	88.9	AAWDDglSGSGWV	BBBBBBAABBBBB	-1
L3-13-*	7WEFL	EM	lambda	Homo.sapiens	Hu_IGLV1-47*02	95.5	Hu_IGLV1-47*02	88.9	AAWDDglSGSGWV	BBBBBBAABBEBB	-1
L3-13-*	7WE9J	EM	lambda	Homo.sapiens	Hu_IGLV1-47*02	95.5	Hu_IGLV1-47*02	88.9	AAWDDglSGSGWV	BBBBBBAAEBBBB	-1
L3-13-*	7WE9L	EM	lambda	Homo.sapiens	Hu_IGLV1-47*02	95.5	Hu_IGLV1-47*02	88.9	AAWDDglSGSGWV	BBBBBBAABBBBB	-1
L3-13-*	7L2EK	EM	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	77.8	QSTDNSGTypNWV	BBBBAABABBBBB	-1
L3-13-*	7L2EJ	EM	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	77.8	QSTDNSGTypNWV	BBBBAABABBBBB	-1
L3-13-*	7L2EL	EM	lambda	Homo.sapiens	Hu_IGLV3-25*02	100.0	Hu_IGLV3-25*02	77.8	QSTDNSGTypNWV	BBBBAABABBBBB	-1
L3-13-*	6BLAL	1.55	lambda	Homo.sapiens	Hu_IGLV3-21*01	92.5	Hu_IGLV3-21*01	66.7	QVWDSGRGHplYV	BBBBALLLBBBBB	-1
L3-13-*	6C5VL	EM	lambda	Homo.sapiens	Hu_IGLV3-21*01	92.5	Hu_IGLV3-21*01	66.7	QVWDSGRGHplYV	BBBBALLLBBBBB	-1
L3-13-*	4DCQA	1.94	lambda	Mus.musculus	Hu_IGLV4-69*01	77.3	Hu_IGLV4-69*01	14.3	GVGDTIKEQfvYV	BBBBBBLLBBBBB	-1
L3-13-*	6U59J	EM	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	30.0	LYgyysSRNPDFA	BBBBBBAABALBB	-1
L3-13-*	6U59L	EM	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	30.0	LYgyysSRNPDFA	BBBBBBAABALBB	-1
L3-13-*	6U59E	EM	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	30.0	LYgyysSRNPDFA	BBBBBBAABALBB	-1
L3-13-*	6VO0K	EM	kappa	Oryctolagus.cuniculus	Rb_IGKV1S10*01	85.5	Rb_IGKV1S10*01	40.0	QSnfglSDSRTYN	BALAEEBAAELBB	-1
L3-13-*	6VO0L	EM	kappa	Oryctolagus.cuniculus	Rb_IGKV1S10*01	85.5	Rb_IGKV1S10*01	40.0	QSnfglSDSRTYN	BALAEEBAAELBB	-1
L3-13-*	6VO0J	EM	kappa	Oryctolagus.cuniculus	Rb_IGKV1S10*01	85.5	Rb_IGKV1S10*01	40.0	QSnfglSDSRTYN	BALAEEBAAELBB	-1
L3-13-*	6P65L	EM	kappa	Oryctolagus.cuniculus	Rb_IGKV1S47*01	95.6	Rb_IGKV1S47*01	11.1	LygyiSSDRIDFG	BBBBBBAABBBBB	-1
L3-13-*	6PEHB	2.296	kappa	Homo.sapiens	Rb_IGKV1S47*01	95.6	Rb_IGKV1S47*01	11.1	LygyiSSDRIDFG	BBBBBBAABBBBB	-1
L3-13-*	6P65D	EM	kappa	Oryctolagus.cuniculus	Rb_IGKV1S47*01	95.6	Rb_IGKV1S47*01	11.1	LygyiSSDRIDFG	BBBBBBAABBBBB	-1
L3-13-*	6PEHL	2.296	kappa	Homo.sapiens	Rb_IGKV1S47*01	95.6	Rb_IGKV1S47*01	11.1	LygyiSSDRIDFG	BBBBBBAABBBBB	-1
L3-13-*	6P65G	EM	kappa	Oryctolagus.cuniculus	Rb_IGKV1S47*01	95.6	Rb_IGKV1S47*01	11.1	LygyiSSDRIDFG	BBBBBBAABBBBB	-1
L3-13-*	4HT1L	2.498	kappa	Oryctolagus.cuniculus	Rb_IGKV1S47*01	88.2	Rb_IGKV1S47*01	11.1	QTAYYNsrpdTVA	BBABBAABAEBBB	-1
L3-13-*	6X1VL	2.11	kappa	Oryctolagus.cuniculus	Rb_IGKV1S12*01	89.6	Rb_IGKV1S12*01	22.2	VGHygseNDAYYA	BBBBEBAABBBBB	-1
L3-13-*	5DMGL	2.5	kappa	Oryctolagus.cuniculus	Rb_IGKV1S55*01	92.5	Rb_IGKV1S55*01	11.1	LGYFDCSiadcVA	BBBBBBLABBABB	-1
L3-13-*	5DMGD	2.5	kappa	Oryctolagus.cuniculus	Rb_IGKV1S55*01	92.5	Rb_IGKV1S55*01	11.1	LGYFDCSiadcVA	BBBBBBLABBABB	-1
L3-13-*	5DMGF	2.5	kappa	Oryctolagus.cuniculus	Rb_IGKV1S55*01	92.5	Rb_IGKV1S55*01	11.1	LGYFDCSiadcVA	BBBBBABbEBABB	-1

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022